Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944841.1_cds_XP_016487549.1_78262
CDS Infomation

[gene=LOC107807635] [db_xref=GeneID:107807635] [protein=mannan endo-1,4-beta-mannosidase 2-like] [protein_id=XP_016487549.1] [location=join(26726..27118,28153..28350,30262..30384,30673..30884,31146..31554)] [gbkey=CDS]
Sequence

ATGCAAATGGTTAAATCACCAATGAGCAGAAAACTCACAAGAAATGGTGGCCTAATTTAT
CCAGTCATTGGTTTAGCATTATTTGTCACTTTTCTTTATTTATCATTTGGAGATTTATTG
TGGTTCAGTTACAACAAAGAAATAGAGCTAAGTTTTGTGGAGAGAAATGGGACTCAATTC
TTTGTTGATGGTAAAGTTTTTTATATAAATGGTTGGAATTCTTATTGGTTAATGGATCAT
GCTGTGGATTATAGTAAAAGATCAAGAATTAGGGGAATTTTACAAGCTGGTGCTAAGATG
GGTCTCACTGTATGTAGAACTTGGGCTTTTAATGATGGTGGATATAATGCTCTGCAGATT
TCTCCTGGTAGATTTGATGAAAGAGTTTTTAGAGCATTGGATCATGTTATTGCAGAAGCG
AGAAAGAATGGTATTAGGCTAATGCTTAGCTTGGTTAACAATCTGAATGCATTTGGTGGG
AAGACTCAGTATGTAAAATGGGCAGAGAAAGAAGGTGTTGCTTTAAGTTCTTCCAATGAT
TCATTCTTCTATGATCCTACCATTCGTCGTTATTTCAAACATTATGTCAAGATGGTGCTA
ACAAGGAGAAACGTATACACTGGGATTGAGTACAGGGACGATCCAACTATCTTTGCATGG
GAGTTAATAAACGAGCCTCGCTGCATGACCGATCCTTCTGGTGACACACTCCAAGATTGG
ATAGAAGAGATGTCGACATTTGTGAAATCAATTGATAGGAAACATCTGCTCACCGTAGGC
CTAGAAGGATTCTACGGCCGTAAAAGTCCCAAAAGATCAACTGGCAATCCAGAATTTTGG
GCTGCGGATCTTGGATCAGATTTCATCCGCAACTCCATGCTTTCGACGATTGATTTCGCC
TCTGTACATATATACCCAGACCATTGGTTTCACAAAAAATTCGAAGAAAAATTAAAATTT
GCAGCCAAATGGATGCTTTCTCACATCGAAGACGGTGACAAGGAACTAAGAAAACCTATA
ATGTTCACTGAATTCGGTTTGTCAAACGAGAACGATGACTTTGAACCTGTTCAACGAGAT
AGATTCTACAAAATGGTTCTTGATATCATATACAAGTCTGCAAAAAGAAACAGGTCGGGG
GCAGGTTCGTTTATCTGGCAGTTTTTAGTTGAAGGAATGGAACTGTATAATGATGATTTT
GGAATTGTTCCATGGGAGAGACCTTCGACGTATCAGCTAATAACTGAACAGTCGTGTAGG
CTGGCTAGAGAACACGGTGTATTGCCTACACAAACGGAACATTTGAAGGATTTTTGTACA
CGAACGAGTGTATAA

Peptide Sequence

PEP ID

XP_016487549.1
PEP Infomation

PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Nicotiana tabacum]
Sequence

MQMVKSPMSRKLTRNGGLIYPVIGLALFVTFLYLSFGDLLWFSYNKEIELSFVERNGTQF
FVDGKVFYINGWNSYWLMDHAVDYSKRSRIRGILQAGAKMGLTVCRTWAFNDGGYNALQI
SPGRFDERVFRALDHVIAEARKNGIRLMLSLVNNLNAFGGKTQYVKWAEKEGVALSSSND
SFFYDPTIRRYFKHYVKMVLTRRNVYTGIEYRDDPTIFAWELINEPRCMTDPSGDTLQDW
IEEMSTFVKSIDRKHLLTVGLEGFYGRKSPKRSTGNPEFWAADLGSDFIRNSMLSTIDFA
SVHIYPDHWFHKKFEEKLKFAAKWMLSHIEDGDKELRKPIMFTEFGLSNENDDFEPVQRD
RFYKMVLDIIYKSAKRNRSGAGSFIWQFLVEGMELYNDDFGIVPWERPSTYQLITEQSCR
LAREHGVLPTQTEHLKDFCTRTSV

Transcript Sequence

Gene sequence data has not been registered.